1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGACGTGTCCTTGGATAATTTGCGTCCTAGTCCTTCAGCCAGATGTAGAAGAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGgttaggattaatacaccatcgtagaaagaaaaaaaaaatctctttcttaagtggtgtttaattagttgctacacatacattttttttaactagcttgtta...
species | Glycine max |
transcript | GLYMA12G32050.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAG GTCATATGGGTTGAGCACGTAGAAGTGGATGACAGAGGTGTCCATAATCTAEST: gi|208204360|gb|GE002363.1|GE002363
genomic: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGgttaggatta ... attgccgtagGTCATATGGGTTGAGCACGTAGAAGTGGATGACAGAGGTGTCCATAATCTA
EST: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAG GTCATATGGGTTGAGCACGEST: gi|193543148|gb|FK502453.1|FK502453
genomic: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGgttaggatta ... attgccgtagGTCATATGGGTTGAGCACG
EST: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAG GTCATATGGGTTGAGCACEST: gi|208207435|gb|GE002218.1|GE002218
genomic: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGgttaggatta ... attgccgtagGTCATATGGGTTGAGCAC
EST: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAG GTCATATGGGTTGAGCACGTAGAAGTGGATGACAGAGGTGTCCATAATCTA
genomic: GAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGgttaggatta ... attgccgtagGTCATATGGGTTGAGCACGTAGAAGTGGATGACAGAGGTGTCCATAATCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACGTGTCCTTGGATAATTTGCGTCCTAGTCCTTCAGCCAGATGTAGAAGAAGGCCCTCAGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGgttaggattaatacaccatcgtagaaagaaaaaaaaaatctctttcttaagtggtgtttaattagttgctacacatacattttttttaactagcttgtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaaaa