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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGTATGTCAACAGAACACCTAAGTCAAACAAAGCAATTCATATTGTTTCTAGTGCTTACAAGGCTACTTTAACTTGGAATAATATGCGCACTCTCCAGgtaagtattactattatactgggtttgatagataatatgccattgacctcactagggttctattaatgcatgaaatag

Basic information

species Glycine max
transcript GLYMA12G14060.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192326408|gb|FK017695.1|FK017695
EST:     CTAGTGCTTACAAGGCTACTTTAACTTGGAATAATATGCGCACTCTCCAG                         GAATGTCGTGAAGCCTGTGGAGGACAAGGAGTTAAATCTGAAAATCGTGTT
genomic: CTAGTGCTTACAAGGCTACTTTAACTTGGAATAATATGCGCACTCTCCAGgtaagtatta ... catgaaatagGAATGTCGTGAAGCCTGTGGAGGACAAGGAGTTAAATCTGAAAATCGTGTT
EST: gi|19453582|gb|BM954992.1|BM954992
EST:     CTAGTGCTTACAAGGCTACTTTAACTTGGAATAATATGCGCACTCTCCAG                         GAATGTCGTGAAGCCTGTGGAGGACAAGGAGTTAAATCTGAAAATCGTGTT
genomic: CTAGTGCTTACAAGGCTACTTTAACTTGGAATAATATGCGCACTCTCCAGgtaagtatta ... catgaaatagGAATGTCGTGAAGCCTGTGGAGGACAAGGAGTTAAATCTGAAAATCGTGTT