1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TGAGTTGCCAGAATTTCTGGGAGGTACCTGTACCTGTGCAGATCAGGGTGGTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttacactgacctttctgcttagtagccttaacatgtgttctactatatcaatcttactacatgctaactgttaattgcatgtggacattttgcag
species | Glycine max |
transcript | GLYMA12G04460.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAG ATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTAEST: gi|208307684|gb|GE107166.1|GE107166
genomic: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttaca ... cattttgcagATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTA
EST: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATATTGAAG ATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAEST: gi|193412559|gb|FK377790.1|FK377790
genomic: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttaca ... cattttgcagATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTA
EST: GTTGCCTCAGATTTGATAAAGGACCCTGGAAAAACCCTGAAATATTGAAG ATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTAEST: gi|22524635|gb|BU083446.1|BU083446
genomic: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttaca ... cattttgcagATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTA
EST: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATATTGAAG ATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTAEST: gi|193725887|gb|FK660195.1|FK660195
genomic: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttaca ... cattttgcagATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTA
EST: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAG ATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTA
genomic: GTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttaca ... cattttgcagATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTTCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGTTGCCAGAATTTCTGGGAGGTACCTGTACCTGTGCAGATCAGGGTGGTTGCCTCAGATCTGATAAAGGACCCTGGAAAAACCCTGAAATTTTGAAGgttatttacactgacctttctgcttagtagccttaacatgtgttctactatatcaatcttactacatgctaactgttaattgcatgtggacattttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG