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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGCATCTGCCAACTCCAAATTTGGCACTGGCACATTACTTCCTGCAGCATCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAGgtactggcgtgttacatcccattttagccaattagtcttctttccccatgccatgagttttagtgtccataattttttgatgatctgggtttggatttag

Basic information

species Glycine max
transcript GLYMA12G01340.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193336445|gb|FK298933.1|FK298933
EST:     TCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAG                         GTTCTCTTCTGGTCATGGAACTATTGGGATGTTTGCTGGCACCGGTGGACC
genomic: TCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAGgtactggcgt ... ttggatttagGTTCTCTTCTGGTCATGGAACTATTGGGATGTTTGCTGGCACCGGTGGACC
EST: gi|193666510|gb|FK610133.1|FK610133
EST:     TCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAG                         GTTCTCTTCTGGTCATGGAACTATTGGGATGTTTGCTGGCACCGGTGGACC
genomic: TCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAGgtactggcgt ... ttggatttagGTTCTCTTCTGGTCATGGAACTATTGGGATGTTTGCTGGCACCGGTGGACC