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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTATGTGTCCAACATGTCTTTGCACTGGAATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAGgttcagtaattatagttatcccgagcagttataagaaaaatctggtattttttgttgaagtggtttttatttccgagcag

Basic information

species Glycine max
transcript GLYMA12G00600.3
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192307758|gb|FK001702.1|FK001702
EST:     ATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAG                         GTTCAATAATTTGGAAGTGGTATTCGTTTCCGTGGCGGAGAAATGGATTTT
genomic: ATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAGgttcagtaat ... ttccgagcagGTTCAATAATTTGGAAGTGGTATTCGTTTCCGTGGCGGAGAAATGGATTTT
EST: gi|208189309|gb|GD985645.1|GD985645
EST:     ATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAG                         GTTCAATAATTTGGAAGTGG
genomic: ATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAGgttcagtaat ... ttccgagcagGTTCAATAATTTGGAAGTGG
EST: gi|120491318|gb|EH219485.1|EH219485
EST:     ATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAG                         GTTCAATAATTTGGAAGTGGTATTCGTTTCCGTGGCGGAGAAATGGATTTT
genomic: ATGGCCATGGCAAGCGAACATGATCCACGAATTGATCCATTTGATTAGAGgttcagtaat ... ttccgagcagGTTCAATAATTTGGAAGTGGTATTCGTTTCCGTGGCGGAGAAATGGATTTT