1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AGGACTGTGGCATACTGTGTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAGgtatgccctttccatcccttagatttgcttctcttgtcattaaaacttaaatgaaacaaaatgatgtgattatattatttatagtgcactatgactacca...
species | Glycine max |
transcript | GLYMA11G34470.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAG ACTATACCAAGGCTCTTGGATTGTACCGAAGACTTGGAAAATGTGEST: gi|193629243|gb|FK572815.1|FK572815
genomic: TTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAGgtatgccctt ... tttgaaacagACTATACCAAGGCTCTTGGATTGT-CCGA-G-CTTGGAAAATGTG
EST: TTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAG ACTATACCAAGGCTCTTGGATTGTCCGAGCTTGGAAAATGTG
genomic: TTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAGgtatgccctt ... tttgaaacagACTATACCAAGGCTCTTGGATTGTCCGAGCTTGGAAAATGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGACTGTGGCATACTGTGTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAGgtatgccctttccatcccttagatttgcttctcttgtcattaaaacttaaatgaaacaaaatgatgtgattatattatttatagtgcactatgactacca
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA