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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTGCAAGGATTTTCCTATTCATGTTCTTTTTTATCCACATGTGGACCCATTTTGACGAGgcaagcattttctctgtgattccccatcacatataacttcagagttccctctttgattttcatctaggaaattaatccgaacattttgctccctaatttcag

Basic information

species Glycine max
transcript GLYMA11G31750.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192294239|gb|FG986328.1|FG986328
EST:     TTTTCCTATTCATGTTCTTTTTTATCCACATGTGGACCCATTTTGACGAG                         GTTAAGGAGATCTTCCCATTGGGTTTTTACAGCTTGCTTGTGGTGCCTCCA
genomic: TTTTCCTATTCATGTTCTTTTTTATCCACATGTGGACCCATTTTGACGAGgcaagcattt ... ctaatttcagGTTAAGGAGATCTTCCCATTGGGTTTTTACAGCTTGCTTGTGGTGCCTCCA
EST: gi|20811415|gb|BQ295893.1|BQ295893
EST:     TTTCCTATTCATGTTCTTTTTAATCCACATGGTGGACCCATTTTGACGAG                         GTTAAGGAGATCTTCCCATTGGGTTTTTACAGCTTGCTTGTGGTGCCTCCA
genomic: TTTCCTATTCATGTTCTTTTTTATCCACAT-GTGGACCCATTTTGACGAGgcaagcattt ... ctaatttcagGTTAAGGAGATCTTCCCATTGGGTTTTTACAGCTTGCTTGTGGTGCCTCCA