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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTACTAGACAGAGCAGACAGTTATTTGTTCACGGGTGCTCTAGCATACAACTTTGTCAAAACCTTTTTACCAGTGTATGGAGTATGACATGAAACAGTGgtaagtgtttcttcaagttagagtttaaatttcatctgcttatagtttaaaacaatatattatcagtaaatatcaagtaacaagtaacaatctttaccagagtaattaagatatcttatcagctgtaattttttataag

Basic information

species Glycine max
transcript GLYMA11G30030.3
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51344346|gb|CO985079.1|CO985079
EST:     ACTTTGTCAAAACCTTTTTACCAGTGTATGGAGTATGACATGAAACAGTG                         TTAGGTGGTATCTGCATGGCATGTTCACTGACAACATTGGCGCATATCCGA
genomic: ACTTTGTCAAAACCTTTTTACCAGTGTATGGAGTATGACATGAAACAGTGgtaagtgttt ... tttttataagTTAGGTGGTATCTGCATGGCATGTTCACTGACAACATTGGCGCATATCCGA
EST: gi|213594113|gb|DB981413.1|DB981413
EST:     CTTTTTACCAGTGTATGGAGTATGACATGAAACA--G                         -T-GGTGGTATCTGCATGGCATGTTCACTGACAACATTGGTGCATATCCGA
genomic: CTTTTTACCAGTGTATGGAGTATGACATGAAACAGTGgtaagtgttt ... tttttataagTTAGGTGGTATCTGCATGGCATGTTCACTGACAACATTGGCGCATATCCGA