1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGGTGAAAATCCTCATCAAAAAGCTGCATTCTATGTTGACAAAAGCCTTTCTGAAGTTAATGCTGGTGGAATTGCTACAGCCATCCAACACCATGGAAAGgtgggaatcacctactaatttcttgtctaaatgatctataaccattggtgtatatatatatacacatatatataggagggatccacttgctccaagagta...
species | Glycine max |
transcript | GLYMA11G25900.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TACAGCCATCCAANC-CCATGGGAAAG GAGATGTCATAT-ATAACTACTTGGATGCTGATGCTGCTTGGAACTGTGTEST: gi|37993938|gb|CF805684.1|CF805684
genomic: TACAGCCATCCAA-CACCAT-GGAAAGgtgggaatca ... tgtcatgcagGAGATGTCATATAATAACTACTTGGATGCTGATGCTGCTTGGAACTGTGT
EST: CTGAAGTTAATGCTGGTGGAATTGCTACAGCCATCCAACACCATGGAAAG GAGATGTCATATAATAACTACTTGGATGCTGATGCTGCTTGGAACTGTGTA
genomic: CTGAAGTTAATGCTGGTGGAATTGCTACAGCCATCCAACACCATGGAAAGgtgggaatca ... tgtcatgcagGAGATGTCATATAATAACTACTTGGATGCTGATGCTGCTTGGAACTGTGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGAAAATCCTCATCAAAAAGCTGCATTCTATGTTGACAAAAGCCTTTCTGAAGTTAATGCTGGTGGAATTGCTACAGCCATCCAACACCATGGAAAGgtgggaatcacctactaatttcttgtctaaatgatctataaccattggtgtatatatatatacacatatatataggagggatccacttgctccaagagta
- - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA