1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TGACATGGTCACTAATGCTCTGATGCATGCTGAAGATTGCTTAACATACATGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttcttttacttaattacttctgatattactgttattaagttcatgccaatcatcttgcaatgatataccatcatttatctgcatgttttatatt...
species | Glycine max |
transcript | GLYMA11G11960.3 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTCEST: gi|7478069|gb|AW666124.1|AW666124
genomic: CGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
EST: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTCEST: gi|58014892|gb|CX701634.1|CX701634
genomic: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
EST: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTCEST: gi|208337947|gb|GE133887.1|GE133887
genomic: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
EST: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTCEST: gi|120491021|gb|EH219188.1|EH219188
genomic: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
EST: CCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTCEST: gi|17153400|gb|BM143333.1|BM143333
genomic: CCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
EST: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTCEST: gi|208340738|gb|GE133674.1|GE133674
genomic: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
EST: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAG ATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
genomic: TGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttct ... gccgtgacagATAATGGCAATTGGAACACTTGCATTATGCTACAATAACATTGAGGTCTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGACATGGTCACTAATGCTCTGATGCATGCTGAAGATTGCTTAACATACATGGCTGCTTTACGTGACCCGCCTATATTTCGCTTTTGTGCTATACCCCAGgtgctgttcttttacttaattacttctgatattactgttattaagttcatgccaatcatcttgcaatgatataccatcatttatctgcatgttttatatt
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