1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGAAAAATTAAAGAATGAAAGGACTGCATTTGAGTCCAGAGAACAGTTAGAGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCCgtgagtatctttttaaatctgctattgataaatttttgacatttttcaataaatttctaatgaattaaatgacag
species | Glycine max |
transcript | GLYMA11G07550.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCC GATATGCTGGATCCACAGTTTCAGAACTTAAGCTEST: gi|208169011|gb|GD970528.1|GD970528
genomic: AGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCCgtgagtatct ... taaatgacagGATATGCTGGATCCACAGTTTCAGAACTTAAGCT
EST: AGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCC GATATGCTGGATCCACAGTTTCAGAACTTAAGEST: gi|193514273|gb|FK470589.1|FK470589
genomic: AGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCCgtgagtatct ... taaatgacagGATATGCTGGATCCACAGTTTCAGAACTTAAG
EST: AGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCC GATATGCTGGATCCACA
genomic: AGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCCgtgagtatct ... taaatgacagGATATGCTGGATCCACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAAAATTAAAGAATGAAAGGACTGCATTTGAGTCCAGAGAACAGTTAGAGAGATCTGTATCTGACAAGTTTTGTAGAAGACAAGACTCTTCATCCTCCgtgagtatctttttaaatctgctattgataaatttttgacatttttcaataaatttctaatgaattaaatgacag
- - - - - - - - - - - - - - - - - - - - - - - - - GAGATC