1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CGTAGCAGTACTAGCTCTCCACCACAACCTAGACTGCCTCTAGTTTCCAGTGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGgttagttgcaatctttcttcaacgttaagtaacaaaaccttttttttccttacaagaatgtgataattagtcttaaagcttttaagattatatcagagaa...
species | Glycine max |
transcript | GLYMA10G38970.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ATTGATCTCAATGACAAAG ATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGACEST: gi|4313972|gb|AI461091.1|AI461091
genomic: ATTGATCTCAATGACAAAGgttagttgca ... gtctttgcagATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGAC
EST: TGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAGAG ATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGACEST: gi|6719797|gb|AW307444.1|AW307444
genomic: TGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGgttagttgca ... gtctttgcagATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGAC
EST: TGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAG ATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGACEST: gi|7234450|gb|AW569787.1|AW569787
genomic: TGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGgttagttgca ... gtctttgcagATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGAC
EST: TGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAG ATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGAC
genomic: TGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGgttagttgca ... gtctttgcagATGTTCAAGAATGCTAAAATTCAAACTAGATAGATTATGCAGAGTTGGGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGTAGCAGTACTAGCTCTCCACCACAACCTAGACTGCCTCTAGTTTCCAGTGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGgttagttgcaatctttcttcaacgttaagtaacaaaaccttttttttccttacaagaatgtgataattagtcttaaagcttttaagattatatcagagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT