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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCGGGAACTTCAACTGCTCTGAACCAGCAAATGCATCCCTCTTTGCTACAGCATTCTGTACATGTTGGAAACTCAACTGTAGGACATAATATTCAAATGgttcgtccagacgccaacttttgccaagttttgcttgtgttttttagtcctttaatgttgcacatatattgacactttgaaaatttatgcactttgcacc...

Basic information

species Glycine max
transcript GLYMA10G36350.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254324260|gb|GR840577.1|GR840577
EST:     AGCATTCTGTACATGTTGGAAACTCAACTGTAGGACAT-ATATTCAAATG                         CA-TGGCCCTCCATGTCATCAGCAAATTCTCAGTTACTGAGTAAAGGTGAT
genomic: AGCATTCTGTACATGTTGGAAACTCAACTGTAGGACATAATATTCAAATGgttcgtccag ... attaaaacagCATTGCCCCTCCATGTCATCAGCAAATTCTCAGTTACTGAGTAAAGGTGAT
EST: gi|16348303|gb|BI973898.1|BI973898
EST:     AGCATTCTGTACATGTTGGAAACTCAACTGTAGGACATAATATTCAAATG                         CATTGCCCCTCCATGTCATCAGCAAATTCTCAGTTACTGAGTAAAGGTGAT
genomic: AGCATTCTGTACATGTTGGAAACTCAACTGTAGGACATAATATTCAAATGgttcgtccag ... attaaaacagCATTGCCCCTCCATGTCATCAGCAAATTCTCAGTTACTGAGTAAAGGTGAT