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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGTTAATCCATTTACCAAatatcctttatacgtgccttacgtaaattacatatgaaccagcatatcattatataatgtggaaaaaaggaatggcattgtttccatcctgcatttattg...

Basic information

species Glycine max
transcript GLYMA10G35280.2
intron # 8
splice site 5'
intron type U12 (go to U12 genes for details)

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G35280.2 (Glycine max), 5'ss of exon 8
lower sequence: AT3G54830.1 (Arabidopsis thaliana), 5'ss of exon 8
GTGGTTAATCCATTTACCAAatatcctttat-acgtgccttacgtaaattacatatgaaccagcatatcattat-ataa---tgtggaaaaaaggaatggcattgtttccatcctgcatttattg------------------------------
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GTTGTTAATCCATTTACCAAATATCCTTTATCAAGAAATATTCAGAGACTTTTCATTTATCTCTgtaattttgtcataagcttattcataatataaactgaaaattgtgtggccttaatagaaagaaagcacatatgctttgacattatctccag