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TCCAGCTGTAGTTAGCAAATTATACAAGGCAATAAATTCCAATGGAGGTGTAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctcttggtttcttttatgtgatgcaagttactcacagaatatttacctgaaatgttttgggttagatctaggtaaggtaaaggaaataatttcc...
species | Glycine max |
transcript | GLYMA10G34370.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACAEST: gi|120532166|gb|EH260299.1|EH260299
genomic: ACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACA
EST: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTTCGGGTEST: gi|22524365|gb|BU083176.1|BU083176
genomic: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGT
EST: ACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACAEST: gi|9899914|gb|BE608882.1|BE608882
genomic: ACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACA
EST: TAACATATATACATGGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTTTGGGTTTTGGGTTATAAACTTAACGAGGCTCATACAEST: gi|9564018|gb|BE473527.1|BE473527
genomic: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACA
EST: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACAEST: gi|193710242|gb|FK642940.1|FK642940
genomic: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACA
EST: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTTTGGGTTTTGGGTTATAAACTTAACGEST: gi|6916528|gb|AW398058.1|AW398058
genomic: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACG
EST: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCG TTGGCTTATATGTTNTGGGTTTTGGGTTATAAACTTAACGAGGCTCATACA
genomic: TAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctct ... tttgtctcagTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCAGCTGTAGTTAGCAAATTATACAAGGCAATAAATTCCAATGGAGGTGTAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGgtatgtctcttggtttcttttatgtgatgcaagttactcacagaatatttacctgaaatgttttgggttagatctaggtaaggtaaaggaaataatttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaataa