1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGTGGCTGCTGATGCTAAGTTGAATTTTGATGATAATGCTGCATATCGCCAGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttcttattttgtttgtgttttaccttacttgtgaatggagcatatgatccctataggcatattcccattccatctttgccacctgagctggggg...
species | Glycine max |
transcript | GLYMA10G04480.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATTEST: gi|17518793|gb|BM187835.1|BM187835
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATTEST: gi|254325002|gb|GR834427.1|GR834427
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATTEST: gi|15000418|gb|BI321232.1|BI321232
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAEST: gi|298179372|gb|HO027843.1|HO027843
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTA
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATTEST: gi|151406201|gb|EV276016.1|EV276016
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATTEST: gi|6727069|gb|AW311423.1|AW311423
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
EST: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
genomic: AGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttct ... ctttgaacagGTGACTGCTGCAAAGGCAGATTTAAATTATATTGGGTTAGATGGAGAAATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGGCTGCTGATGCTAAGTTGAATTTTGATGATAATGCTGCATATCGCCAGAAAGAGATATTTTCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttacttcttattttgtttgtgttttaccttacttgtgaatggagcatatgatccctataggcatattcccattccatctttgccacctgagctggggg
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA