1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACATgtgagaatttatattatttctgtctctccatctcatatgtagagggaatttctatttcttttgtaaaaattgaatttcctttaagttcacaccgaaagtt...
species | Glycine max |
transcript | GLYMA09G40150.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGGCTGAGCTTCTTCTAGGACAT CCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAGEST: gi|209727344|gb|BW655275.1|BW655275
genomic: GTTGGCTGAGCTTCTTCTAGGACATgtgagaattt ... ctatttgcagCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAG
EST: GCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACAT CCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAG
genomic: GCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACATgtgagaattt ... ctatttgcagCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACATgtgagaatttatattatttctgtctctccatctcatatgtagagggaatttctatttcttttgtaaaaattgaatttcctttaagttcacaccgaaagtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctccatc