1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TGTGGGAGCTTTTAGTCCAGACAATTCAAATTCTATCCTATACAAGCTTTTTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAGgtaattgtggagcttattagaatttcctttgagtaatgtcaaaaacttttaagtgaacttattgtctgcattcaactatgcctcatgtccttggggttat...
species | Glycine max |
transcript | GLYMA09G39120.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAG CCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCCEST: gi|208189597|gb|GD987725.1|GD987725
genomic: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAGgtaattgtgg ... cttatagcagCCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCC
EST: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAG CCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCCEST: gi|193695633|gb|FK633447.1|FK633447
genomic: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAGgtaattgtgg ... cttatagcagCCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCC
EST: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAG CCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCCEST: gi|208268945|gb|GE068134.1|GE068134
genomic: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAGgtaattgtgg ... cttatagcagCCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCC
EST: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAG CCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCC
genomic: TTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAGgtaattgtgg ... cttatagcagCCTGATCAGAAAGCAGATGAGACATGGAGTCCACACGCCTTCCAATCTTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGGGAGCTTTTAGTCCAGACAATTCAAATTCTATCCTATACAAGCTTTTTGGTAACGCTTCAACACTAGACCGTGACAAATCGACTAGTATTGTTGAGgtaattgtggagcttattagaatttcctttgagtaatgtcaaaaacttttaagtgaacttattgtctgcattcaactatgcctcatgtccttggggttat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttggggt