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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGGATGGAGTGCGAGGATTACGTGTCACGCTGAGCGCAACTGTTCATGATGTGTTATACTACATGAGCCCAATTTACTGTCAAGACATAATTAACTCGgtatcttttttttttttttgtgtgtgtttactgtttatgtttgtttttctgaatcttccttttaaaatttatcagatctaggtgaatttcttccttttaa...

Basic information

species Glycine max
transcript GLYMA09G36920.1
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA09G36920.1 (Glycine max), 5'ss of exon 8
lower sequence: AT1G31480.1 (Arabidopsis thaliana), 5'ss of exon 10
TTTGGATGGAGTGCGAGGATTACGTGTCACGCTGAGCGCAACTGTTCATGATGTGTTATACTACATGAGCCCAATTTACTGTCAAGACATAATTAACTCGgtatct------------tttttttttttttgtgtgtgtttactg--tttatgtttgttttt--ctgaatcttc---cttttaaaatttatcagatctaggtgaatttcttccttttaa------------------------------------------------------------------------
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TTTAGACGGTGTACGGCGTTTCCGAGAGATGCTAAGCGCAACTGTTCATGATGTGTTATACTACATGAGCCCCATTTATTGTCAGGCTATAATTGATTCGgtattgatatatcccaaattttatgctctctctgtcttcttaccaaattgaaacctattcgtgattgagtttttagattttgtgacaccagaaaaccttaatagatattgttactttaattttctgtattgttataactgataatcttgtttagtatgaaaagtgaattgtgctccattttcgttttgcag