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CATATAACAAAGCTTTGGAGGATGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagttttattgctggtttagtacctttttgtgttaaaaatttcttcctcccaatattaggaaaaaaaatttacactcattttgaagcaagactgagtc...
species | Glycine max |
transcript | GLYMA09G28650.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATC GAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAGEST: gi|193324828|gb|FK288068.1|FK288068
genomic: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagtttta ... taaactgcagGAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAG
EST: CCTATTGATGCTCAGGATC GAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAGEST: gi|208176087|gb|GD974318.1|GD974318
genomic: CCTATTGATGCTCAGGATCgtaagtttta ... taaactgcagGAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAG
EST: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATC GAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAGEST: gi|209725416|gb|BW658278.1|BW658278
genomic: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagtttta ... taaactgcagGAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAG
EST: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATC GAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAGEST: gi|193333955|gb|FK301343.1|FK301343
genomic: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagtttta ... taaactgcagGAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAG
EST: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATC GAGGTATAATGCTGGGGCTAGTAAAAAGEST: gi|207717196|gb|GD697690.1|GD697690
genomic: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagtttta ... taaactgcagGAGGTATAATGCTGGGGCTAGTAAAAAG
EST: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATC GAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAG
genomic: TGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagtttta ... taaactgcagGAGGTATAATGCTGGGGCTAGTAAAAAGCTGCATAGGTACCAAATTCACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATATAACAAAGCTTTGGAGGATGCTATTGCTGTCCTTGACAAAATTGCAATGCCTATTGATGCTCAGGATCgtaagttttattgctggtttagtacctttttgtgttaaaaatttcttcctcccaatattaggaaaaaaaatttacactcattttgaagcaagactgagtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttcctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaaaa