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TACTTGATGGCATTGGCCCTCATGGTGATATTAACTAGAAAAGTGGATCTTGTACCTCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATGgtatggtggatggcattaaacacaacatattggttttgattgttgtactaattctaaaatctcagtcttctctattaaaaaagagagataaaaatggtca...
species | Glycine max |
transcript | GLYMA09G15550.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AGATTTTTAGGTTTCTTAAAAATG GAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGGEST: gi|207801118|gb|GD774149.1|GD774149
genomic: AGATTTTTAGGTTTCTTAAAAATGgtatggtgga ... ttttcaatagGAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGG
EST: TCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATG GAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGG
genomic: TCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATGgtatggtgga ... ttttcaatagGAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACTTGATGGCATTGGCCCTCATGGTGATATTAACTAGAAAAGTGGATCTTGTACCTCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATGgtatggtggatggcattaaacacaacatattggttttgattgttgtactaattctaaaatctcagtcttctctattaaaaaagagagataaaaatggtca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gataaaaa