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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGACTTGGAGAGCAGATTGCTGCCTCAGGAATTTCTGTGTGGAACCCAGCTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcactctttcttagcccttccctccttgacttgcataatttgtatggggttcagttgcattttgttctctaaccatttcatgttctttgagcag

Basic information

species Glycine max
transcript GLYMA09G08190.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23730792|gb|BU763501.1|BU763501
EST:     CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
EST: gi|192321692|gb|FK014036.1|FK014036
EST:     CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
EST: gi|105637292|gb|DY577107.1|DY577107
EST:     CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
EST: gi|192308220|gb|FK000856.1|FK000856
EST:     CTTTTGATGTTACTCCTGCTAATTTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
EST: gi|254341135|gb|GR854863.1|GR854863
EST:     CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
EST: gi|208252035|gb|GE046524.1|GE046524
EST:     TGCTAATCTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: TGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
EST: gi|302141327|gb|HO212203.1|HO212203
EST:     CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAG                         GGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC
genomic: CTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGgtctttcact ... ctttgagcagGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTC