1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGgtaagagttcttcttgttgaatagatgaaacaagtttctaaagaggttttcctttcttttgttcttgttttgtaattttataattcccactttatctctt...
species | Glycine max |
transcript | GLYMA08G46170.3 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACCTG GGGGTTTGTAAATGACACATACAAGATGGACCTAATTCTTGTEST: gi|9903205|gb|BE612173.1|BE612173
genomic: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGgtaagagttc ... atgctggcagGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGT
EST: CTAAACATGACTCAACTAACTTG GGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCEST: gi|16343443|gb|BI969038.1|BI969038
genomic: CTAAACATGACTCAACTAACTTGgtaagagttc ... atgctggcagGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCC
EST: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTG GGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCEST: gi|6566336|gb|AW234009.1|AW234009
genomic: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGgtaagagttc ... atgctggcagGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCC
EST: TTGCTTCAGGATGCAAGTCTGAATGATCTAAACATGACTCAACTAACTTG GGGGCTTGTAAATGACACATACAAGATGGACCTAATACTTGTACATEST: gi|21256573|gb|BQ453461.1|BQ453461
genomic: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGgtaagagttc ... atgctggcagGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACAT
EST: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTG GGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCC
genomic: TTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGgtaagagttc ... atgctggcagGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGgtaagagttcttcttgttgaatagatgaaacaagtttctaaagaggttttcctttcttttgttcttgttttgtaattttataattcccactttatctctt
- - - - AGGATG