1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GGCTTGTGATGCATTAAGAAGCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacctctagttcccgtgatataaaaattttatttaatgaaatagagtgaattgctagattaaagaaatcataggttgtcgaatagtcactctgta...
species | Glycine max |
transcript | GLYMA08G43220.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGT GAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAEST: gi|22524880|gb|BU083691.1|BU083691
genomic: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacct ... atttattcagGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
EST: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGT GAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAEST: gi|192300945|gb|FG993005.1|FG993005
genomic: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacct ... atttattcagGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
EST: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGT GAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAEST: gi|22524871|gb|BU083682.1|BU083682
genomic: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacct ... atttattcagGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
EST: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGT GAAGACCCCACAACTATGAGGTGGCTACAACAATTGCTTCACAATGTTGGAEST: gi|22522343|gb|BU081154.1|BU081154
genomic: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacct ... atttattcagGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
EST: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGT GAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAEST: gi|192300944|gb|FG993004.1|FG993004
genomic: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacct ... atttattcagGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
EST: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGT GAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
genomic: GCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacct ... atttattcagGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTTGTGATGCATTAAGAAGCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTgtaagtacctctagttcccgtgatataaaaattttatttaatgaaatagagtgaattgctagattaaagaaatcataggttgtcgaatagtcactctgta
- - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaataga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - taaagaaa