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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGCTCTCACTGGAAAGTACACTCCTGATAAACCACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttcttctgatatttacagatctaataacttacaacctcattatttacttcctcaagggtgtatttatttttgcag

Basic information

species Glycine max
transcript GLYMA08G41630.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10231875|gb|BE800763.1|BE800763
EST:     CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGG                         CTCCAACCTTTGCTG
genomic: CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttct ... atttttgcagCTCCAACCTTTGCTG
EST: gi|31464900|gb|CD406928.1|CD406928
EST:     CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGG                         CTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
genomic: CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttct ... atttttgcagCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
EST: gi|14205390|gb|BG839068.1|BG839068
EST:     CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGG                         CTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
genomic: CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttct ... atttttgcagCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
EST: gi|105631910|gb|DW246240.1|DW246240
EST:     CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGG                         CTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
genomic: CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttct ... atttttgcagCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
EST: gi|7690984|gb|AW759119.1|AW759119
EST:     CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGG                         CTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
genomic: CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttct ... atttttgcagCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
EST: gi|22928755|gb|BU545894.1|BU545894
EST:     CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGG                         CTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA
genomic: CACCAAGTGGGCCCCGAGGCAGAATTTATACTCCAGAATTCCTAACAAGGgtactgttct ... atttttgcagCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGAGAGAAGTATGATAAA