1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CAATCTTCGAAGGACAATATATTTAACAATTATGTCTAGTGTTGATTTTGAGGAAGCTGGTCATAAGCTTTTGAAAATTAAGCTAGAGCCAGGTCAAGAGgtgagcttggaatctctgctagcagttactgttctgttgctaaaactatctacttgctgcattttaataatatggaagaactttagaatctatttcaacg...
species | Glycine max |
transcript | GLYMA08G41440.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ATTAAGCTAGAGTCCTAGGTTCTAAGAG ATGGAATTGTGCATTATGCTTTTGGAATGTTGTAGCCAAGAGAGAACCTAEST: gi|193319754|gb|FK284743.1|FK284743
genomic: ATTAAGCTAGAG-CC-AGG-TC-AAGAGgtgagcttgg ... ttggtgacagATGGAATTGTGCATTATGCTTTTGGAATGTTGTAGCCAAGAGAGAACCTA
EST: ATTAAGCTAGAGCCAGGTCAAGAG ATGGAATTGTGCATTATGCTTTTGGAATGTTGTAGCCAAGAGAGAACCTATEST: gi|193398799|gb|FK365197.1|FK365197
genomic: ATTAAGCTAGAGCCAGGTCAAGAGgtgagcttgg ... ttggtgacagATGGAATTGTGCATTATGCTTTTGGAATGTTGTAGCCAAGAGAGAACCTAT
EST: ATTAAGCTAGAGCCAGGTCAAGAG ATGGAATTGTGCATTATGCTTTTGGAATGTTGTAGCCAAGAGAGAACCTAT
genomic: ATTAAGCTAGAGCCAGGTCAAGAGgtgagcttgg ... ttggtgacagATGGAATTGTGCATTATGCTTTTGGAATGTTGTAGCCAAGAGAGAACCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATCTTCGAAGGACAATATATTTAACAATTATGTCTAGTGTTGATTTTGAGGAAGCTGGTCATAAGCTTTTGAAAATTAAGCTAGAGCCAGGTCAAGAGgtgagcttggaatctctgctagcagttactgttctgttgctaaaactatctacttgctgcattttaataatatggaagaactttagaatctatttcaacg
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG