1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggtttttttgcccctattttttttttaatatttcattagtctgactgtctgtctctattttctaattaagtcatttagttcatctaattattcagaa...
species | Glycine max |
transcript | GLYMA08G26180.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAGAGACCATG GA-TCCGGTTTTAATTCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTEST: gi|207775418|gb|GD746849.1|GD746849
genomic: AAGAGACCATGgtgggttttt ... gattgcttagGATTCCGGTTTTAA-TCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTT
EST: AAGAGACCATG GATTCCGGTTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTEST: gi|9819566|gb|BE555079.1|BE555079
genomic: AAGAGACCATGgtgggttttt ... gattgcttagGATTCCGG-TTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTT
EST: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATG GATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTTEST: gi|23734193|gb|BU765320.1|BU765320
genomic: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggttttt ... gattgcttagGATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTT
EST: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATG GATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTTEST: gi|208265553|gb|GE063081.1|GE063081
genomic: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggttttt ... gattgcttagGATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTT
EST: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATG GATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTTEST: gi|209726301|gb|BW659614.1|BW659614
genomic: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggttttt ... gattgcttagGATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTT
EST: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATG GATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTTEST: gi|193644137|gb|FK592486.1|FK592486
genomic: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggttttt ... gattgcttagGATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTT
EST: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATG GATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTT
genomic: GATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggttttt ... gattgcttagGATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGgtgggtttttttgcccctattttttttttaatatttcattagtctgactgtctgtctctattttctaattaagtcatttagttcatctaattattcagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA