1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AGCTTGGTGTGCTAGTTGGGAAAGGAGGACTTCATGGCAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgtgtcccgatctctcaacttagatgcagactccagattttattttggagcctttttccaagcaaaatagccattgcatttcactgactattctccgcgtgtgcag
species | Glycine max |
transcript | GLYMA08G14850.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATTEST: gi|58017612|gb|CX704354.1|CX704354
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATTEST: gi|208074586|gb|GD872479.1|GD872479
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATTEST: gi|208203048|gb|GD997480.1|GD997480
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATTEST: gi|58024685|gb|CX711426.1|CX711426
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATTEST: gi|16349066|gb|BI974661.1|BI974661
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGNTGTGAGCTGATTEST: gi|207696345|gb|GD677812.1|GD677812
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATTEST: gi|209707420|gb|BW670659.1|BW670659
genomic: CTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
EST: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAG ATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
genomic: CAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgt ... gcgtgtgcagATTTTCTTGTGGATGCCTTGGATTATTCTCTATCAAAGTTGTGAGCTGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTTGGTGTGCTAGTTGGGAAAGGAGGACTTCATGGCAATGTTTTCAGGATCAAGCCACCAATGTGTTTCTCCAAAGATGATGCAGgtatggttgtgtcccgatctctcaacttagatgcagactccagattttattttggagcctttttccaagcaaaatagccattgcatttcactgactattctccgcgtgtgcag
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