1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TGTTCATTTCATGGCTTCAAATAATGACTGTGGAGTTAGAGACTTTGACATGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaatatttatatttatatttttgtattatttaaagtagtgtattatggctatcaatctaccttgaatcagtttattaattattaatggtgggggg...
species | Glycine max |
transcript | GLYMA07G40060.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGEST: gi|207807077|gb|GD778014.1|GD778014
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAG
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAAEST: gi|208246755|gb|GE044367.1|GE044367
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAA
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAAEST: gi|58022343|gb|CX709084.1|CX709084
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAA
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|58024987|gb|CX711728.1|CX711728
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|193584456|gb|FK543278.1|FK543278
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|193689306|gb|FK632665.1|FK632665
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: ATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|193490569|gb|FK456394.1|FK456394
genomic: ATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|58022583|gb|CX709324.1|CX709324
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|193348336|gb|FK309544.1|FK309544
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|57575083|gb|CX548058.1|CX548058
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|192332288|gb|FK023937.1|FK023937
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: CTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAACEST: gi|207732145|gb|GD706680.1|GD706680
genomic: CTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
EST: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAAT CACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
genomic: TGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaata ... ctgtccgcagCACACTTCATTGAGCCCAGATGGGAAACTGGTTGTGATTGTTGGAGACAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTCATTTCATGGCTTCAAATAATGACTGTGGAGTTAGAGACTTTGACATGGAAAGATTTCAGCTTTCCAAGCATTTCTCCTTCTCATGGCCCGTAAATgtaagtaatatttatatttatatttttgtattatttaaagtagtgtattatggctatcaatctaccttgaatcagtttattaattattaatggtgggggg
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