1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAGTGGCCTGAAGACGTTTCTGCAAAAGCTAATATCATAAGAATAAATGCCCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtctactattcctccctttattatcataacacatattgaagtatgtccattgtatttgtatgccacaaatttcgatcattctatgctcacttatgttcatcatttggcgcttggaatgtatttatcag
species | Glycine max |
transcript | GLYMA07G29660.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAG GCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTGEST: gi|207756162|gb|GD727061.1|GD727061
genomic: AAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtc ... tatttatcagGCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTG
EST: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAG GCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTGEST: gi|208303897|gb|GE108206.1|GE108206
genomic: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtc ... tatttatcagGCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTG
EST: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAG GCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTGEST: gi|51335549|gb|CO979415.1|CO979415
genomic: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtc ... tatttatcagGCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTG
EST: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAG GCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTGEST: gi|9901574|gb|BE610542.1|BE610542
genomic: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtc ... tatttatcagGCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTG
EST: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAG GCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTG
genomic: CCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtc ... tatttatcagGCATATCTGATGTAACTGAGGCCTATCAAGCTGCCATTAAAGCTGTTACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTGGCCTGAAGACGTTTCTGCAAAAGCTAATATCATAAGAATAAATGCCCAAAAAATGATAGGATATGTGGAAGCCGTTTCCAACAGTTTTATTACAGgttggttgtctactattcctccctttattatcataacacatattgaagtatgtccattgtatttgtatgccacaaatttcgatcattctatgctcacttatgttcatcatttggcgcttggaatgtatttatcag
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