Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGTCAGAAGGCGTGGTCTCAAAGTTTCAGTTGTAGGTATCCCCAAAACCATAGATAATGATATCCCGgtaaggttttattttcttctacattgtggctttaaactcataatttaaaccccattagcatcattgattggtaaatttcttctgctgtctctttgatgcttaatag

Basic information

species Glycine max
transcript GLYMA07G15170.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33390216|gb|CA853423.1|CA853423
EST:     CAAAGTTTCAGTTGTAGGTATCCCCAAAACCATAGATAATGATATCCCG                         GTTATTGATAAGTCCTTTGGCTTTGACACTGCTGTTGAGGAGGCTCAACGA
genomic: CAAAGTTTCAGTTGTAGGTATCCCCAAAACCATAGATAATGATATCCCGgtaaggtttt ... tgcttaatagGTTATTGATAAGTCCTTTGGCTTTGACACTGCTGTTGAGGAGGCTCAACGA
EST: gi|7591258|gb|AW706995.1|AW706995
EST:     TCAAAGTTTCAGTTGTAGGTATCCCCAAAACCATAGATAATGATATCCCG                         GTTATTGATAAGTCCTTTGGCTTTGACACTGCTGTTGAGGAGGCTCAACGA
genomic: TCAAAGTTTCAGTTGTAGGTATCCCCAAAACCATAGATAATGATATCCCGgtaaggtttt ... tgcttaatagGTTATTGATAAGTCCTTTGGCTTTGACACTGCTGTTGAGGAGGCTCAACGA