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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGCACAAAGCTCTATAAATGATTTGACTGgtaagaaatttgttattggcttaacaaccttagatgtgaaccactttaattttagatgaatctcaaatgatttttcattatataatatcacttgaagcaa...

Basic information

species Glycine max
transcript GLYMA07G04640.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193662983|gb|FK600943.1|FK600943
EST:     GATGCACAAAGCTCTATAAATGATTTGACTG                         GTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAAACAAAAGGT
genomic: GATGCACAAAGCTCTATAAATGATTTGACTGgtaagaaatt ... tgtccttcagGTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAA-CAAAAGGT
EST: gi|7146716|gb|AW508638.1|AW508638
EST:     GATGCACAAAGCTCTATAAATGATTTGACTG                         GTTAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAAACAAAA
genomic: GATGCACAAAGCTCTATAAATGATTTGACTGgtaagaaatt ... tgtccttcagGTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAA-CAAAA
EST: gi|208037693|gb|GD832291.1|GD832291
EST:     GATGCACAAAGCTCTATAAATGATTTGACTG                         GTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAACAAAAGGTG
genomic: GATGCACAAAGCTCTATAAATGATTTGACTGgtaagaaatt ... tgtccttcagGTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAACAAAAGGTG
EST: gi|208276269|gb|GE080331.1|GE080331
EST:     GATGCACAAAGCTCTATAAATGATTTGACTG                         GTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAACAAAAGGTG
genomic: GATGCACAAAGCTCTATAAATGATTTGACTGgtaagaaatt ... tgtccttcagGTAAGTGGCTTGGAAGTAGACAGATACGTTGTAACTGGGCAACAAAAGGTG