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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAGgtattcattttctcgatcaccttcctgccttttggtcatttcttgatgtctaatgatttccactttcccttacag

Basic information

species Glycine max
transcript GLYMA07G00490.2
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22525212|gb|BU084023.1|BU084023
EST:     TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAG                         CCTGTGCTTCAGGAACTTGGTAAGCAGAATCCCGGTCTTTTAAGACTGATT
genomic: TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAGgtattcattt ... tcccttacagCCTGTGCTTCAGGAACTTGGTAAGCAGAATCCCGGTCTTTTAAGACTGATT
EST: gi|13788099|gb|BG650691.1|BG650691
EST:     TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAG                         CCTGTGCTTCAGGAACTTGGTAAGCAGAATCCCGGTCTTTTAAGACTGATT
genomic: TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAGgtattcattt ... tcccttacagCCTGTGCTTCAGGAACTTGGTAAGCAGAATCCCGGTCTTTTAAGACTGATT
EST: gi|17964519|gb|BM271253.1|BM271253
EST:     TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAG                         CCTGTGCTTCAGGAACTTGGTAAGCAGAATCCCGGTCTTTTAAGACTGATT
genomic: TTTCAAGCATTGCGTTCAATGGTGCAATCCAATCCACAAATTCTACAGgtattcattt ... tcccttacagCCTGTGCTTCAGGAACTTGGTAAGCAGAATCCCGGTCTTTTAAGACTGATT