1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CTGTTGATTTTCTTAAATCCGCTCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatttcaataactactcatctaacatatttggttaggagccatgtacttttggaattaatactgaacagaatatgttattaaggaataaaaaat...
species | Glycine max |
transcript | GLYMA06G13210.3 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGG GTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGGEST: gi|151413241|gb|EV283049.1|EV283049
genomic: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatt ... tgtaatttagGTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGG
EST: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGG GTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGGEST: gi|208254047|gb|GE052567.1|GE052567
genomic: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatt ... tgtaatttagGTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGG
EST: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCTGTGG GTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGGEST: gi|193561796|gb|FK521701.1|FK521701
genomic: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatt ... tgtaatttagGTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGG
EST: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCTGTGG GTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGGEST: gi|208328485|gb|GE127557.1|GE127557
genomic: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatt ... tgtaatttagGTCCTGCCCAGGAACTTGTTGAGAAGCCTTTCTTTGATACAATAGCTAGGG
EST: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCTGTGG GTCCTGCCCAGGAACTTGTTGAGAAGCCTTTACTTTAGATACAATAGCTAG
genomic: TCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatt ... tgtaatttagGTCCTGCCCAGGAACTTGTTGAGAAGCCTTT-CTTT-GATACAATAGCTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTTGATTTTCTTAAATCCGCTCCTGAAGGGAAGTATGATGCCATAATTGTTGATTCCTCAGATCCAGTGGgtatgtcatttcaataactactcatctaacatatttggttaggagccatgtacttttggaattaatactgaacagaatatgttattaaggaataaaaaat
- - - - - - - - - - - - CTGAAG