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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTCGCATTTCGTTTCCAAAGAGTCGGATGATCAATCAACTCTACGTGAGgtaatgagataatatttagtttggttctcatttctactttttagcggcggattgtttctgatatatacaagatatttttgcatgcag

Basic information

species Glycine max
transcript GLYMA06G07700.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193692089|gb|FK630610.1|FK630610
EST:     TTTCGCATTTCGTTTCCAAAGAGTCGGATGATCAATCAACTCTACGTGAG                         GTGGCTGACTCGTACATTTTGGACGAGAGAGTAGGATTTGCTGAGCCTGTC
genomic: TTTCGCATTTCGTTTCCAAAGAGTCGGATGATCAATCAACTCTACGTGAGgtaatgagat ... ttgcatgcagGTGGCTGACTCGTACATTTTGGACGAGAGAGTAGGATTTGCTGAGCCTGTC
EST: gi|193558943|gb|FK511656.1|FK511656
EST:     TTTCGCATTTCGTTTCCAAAGAGTCGGATGATCAATCAACTCTACGTGAG                         GTGGCTGACTCGTACATTTTGGACGAGAGAGTAGGATTTGCTGAGCCTGTC
genomic: TTTCGCATTTCGTTTCCAAAGAGTCGGATGATCAATCAACTCTACGTGAGgtaatgagat ... ttgcatgcagGTGGCTGACTCGTACATTTTGGACGAGAGAGTAGGATTTGCTGAGCCTGTC