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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGTTGTTCCAGCTCCTAAGCCTGTTGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactattttggctagtcacttcacttgcacattctttattgcttaagttaactacctgagaaatacttgaaactaaaatgatatgtaagttttgaccaatatctaaccgaggaatttctctttcag

Basic information

species Glycine max
transcript GLYMA05G36930.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192296217|gb|FG989758.1|FG989758
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCGGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|192298466|gb|FG988467.1|FG988467
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|31310366|gb|CD395569.1|CD395569
EST:     CAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: CAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|27426839|gb|CA938359.1|CA938359
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGCCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|13789257|gb|BG651848.1|BG651848
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGCCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|14991586|gb|BI317259.1|BI317259
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGCCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|19054069|gb|BM732736.1|BM732736
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
EST: gi|192297433|gb|FG992467.1|FG992467
EST:     TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAG                         CTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA
genomic: TGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCACCTCCAGgtactatttt ... tctctttcagCTTCGTGGTCAGGTCCAATTTCCATTGAACAGAAAATGACCACCTCGTGGA