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TATGTTGGTACTTGGTTCTAGCGCCCTATGATCCAATGCAGTCAAGCCTTCTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatcctaacttttatctcacgtattccaagtcatgttcattttcttaggatttccttgtcatttggtgtgcctgttatatgttgtgcctag
species | Glycine max |
transcript | GLYMA05G32030.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|13789644|gb|BG652235.1|BG652235
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|19053473|gb|BM732140.1|BM732140
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|37994245|gb|CF805991.1|CF805991
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|254341094|gb|GR854822.1|GR854822
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|151394588|gb|EV264459.1|EV264459
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: ACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGCTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|18734862|gb|BM528428.1|BM528428
genomic: ACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|17400997|gb|BM177779.1|BM177779
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|9564218|gb|BE473727.1|BE473727
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|192309223|gb|FG999450.1|FG999450
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: TAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|11412649|gb|BF424660.1|BF424660
genomic: TAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCTEST: gi|17022950|gb|BM093984.1|BM093984
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGEST: gi|22524861|gb|BU083672.1|BU083672
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATG
EST: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAA GTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
genomic: CTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatc ... ttgtgcctagGTTACTTTTGAAACAGCTGGTTACCATGGAGGTTATCCAATGGACCACTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGTTGGTACTTGGTTCTAGCGCCCTATGATCCAATGCAGTCAAGCCTTCTCAATTCCACCTTGGAGGATAAGAATATATCTGAGATTCCAAACTTCAAgtatgttatcctaacttttatctcacgtattccaagtcatgttcattttcttaggatttccttgtcatttggtgtgcctgttatatgttgtgcctag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT