1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TCTGAAGATGAAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttaggattttctactctttcgcagaatcttgcttgaaggaactacttggtctttctttagtgtctgttgctgcaattgaggctcgcaattcttaaaaaattattttcttgttacttctgcag
species | Glycine max |
transcript | GLYMA04G40750.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAG CTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAGEST: gi|193307091|gb|FK268831.1|FK268831
genomic: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttagg ... acttctgcagCTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
EST: AAGAACAATCTATTTGCACAAATATCGACAAGAAG CTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAGEST: gi|9203628|gb|BE329852.1|BE329852
genomic: AAGAACAATCTA-TTGCACAAATATCGACAAGAAGgtagtttagg ... acttctgcagCTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
EST: AAAGGGANATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAG CTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCNGAGAGEST: gi|58018945|gb|CX705687.1|CX705687
genomic: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttagg ... acttctgcagCTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
EST: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAG CTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAGEST: gi|58019174|gb|CX705916.1|CX705916
genomic: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttagg ... acttctgcagCTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
EST: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAG CTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAGEST: gi|151412507|gb|EV282319.1|EV282319
genomic: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttagg ... acttctgcagCTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
EST: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAG CTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
genomic: AAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttagg ... acttctgcagCTTACTCAAGCAGATGTCAAACACTTCTTCGAATCTATTTGCGGAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGAAGATGAAAGGGAGATGTGCTCAAGAACAATCTATTGCACAAATATCGACAAGAAGgtagtttaggattttctactctttcgcagaatcttgcttgaaggaactacttggtctttctttagtgtctgttgctgcaattgaggctcgcaattcttaaaaaattattttcttgttacttctgcag
- - - - - - - GGAGAT
- - - - - - - GAGATG
- - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG