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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttcttcattttgttgaatgataccaagaaagccgccagactcctcttttatctgttttataacatacacttttgcag

Basic information

species Glycine max
transcript GLYMA04G40740.2
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193539697|gb|FK498639.1|FK498639
EST:     GGACTTTTGGCATTGTTGATTACACTAATTATGACGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTA
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTA
EST: gi|207762279|gb|GD731600.1|GD731600
EST:     GGACTTTTGGCATTGTTGATTACACTAATTATGACGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTA
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTA
EST: gi|19453352|gb|BM954762.1|BM954762
EST:     GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
EST: gi|193325939|gb|FK291022.1|FK291022
EST:     GGACTTTTGGCATTGTTGATTACACTAATTATGACGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTA
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTA
EST: gi|19453608|gb|BM955018.1|BM955018
EST:     GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
EST: gi|9819996|gb|BE555509.1|BE555509
EST:     GGACTTTTGGCATTGCTGATTACACTAATTATGATGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
EST: gi|21601642|gb|BQ611973.1|BQ611973
EST:     GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT
EST: gi|192301101|gb|FG990141.1|FG990141
EST:     GGACTCTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCC                         ATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGATAGCTTAT
genomic: GGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCgtaagttctt ... acttttgcagATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTAT