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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCTCTCTCGATTATTTTGGTTGGTGTTGGAGATGGACCATGGGATGAGATGAAGTACTATGATGATAACATTACTGAGCGCTTATTCGACAACTTTCAGgtacttgatagcacttgaaaattcaatgttgtctgcttttatggtaacttttacctttgatagatggagataagaaggactggtgtttggcatgatattg...

Basic information

species Glycine max
transcript GLYMA04G38830.2
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58024262|gb|CX711003.1|CX711003
EST:     TGAAGTACTATGATGATAACATTACTGAGCGATTATTGGACAACTTTCAG                         TTTGTGAATTTCACAAAGATCATGTCCGAGAACACAGAAGCATTGAAGAAG
genomic: TGAAGTACTATGATGATAACATTACTGAGCGCTTATTCGACAACTTTCAGgtacttgata ... attccttcagTTTGTGAACTTCACAAAGATCATGTCCGAGAACACAGAAGCATCGAAGAAG
EST: gi|21677101|gb|BQ629452.1|BQ629452
EST:     GACAACTTTCAG                         TTTGTGAACTTCACAAAGATCATGTCCGAGAACACAGAAGCATCGAAGAAG
genomic: GACAACTTTCAGgtacttgata ... attccttcagTTTGTGAACTTCACAAAGATCATGTCCGAGAACACAGAAGCATCGAAGAAG
EST: gi|15000509|gb|BI321323.1|BI321323
EST:     TGAAGTACTATGATGATAACATTACTGAGCGCTTATTCGACAACTTTCAG                         TTTGTGAACTTCACAAAGATCATGTCCGAGAACACAGAAGCATCGAAGAAG
genomic: TGAAGTACTATGATGATAACATTACTGAGCGCTTATTCGACAACTTTCAGgtacttgata ... attccttcagTTTGTGAACTTCACAAAGATCATGTCCGAGAACACAGAAGCATCGAAGAAG