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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTTTGACTCAAAGCATTGGACTTCTGTCATATACATATTTGATAAAAACACAGCTTGACAGAATAGTAGTACCCATGgtaagctgtatttctcatttgcactatttgaaggtgttggtttaaatgctactttatccaatatagcatgttgaatttttttctgtgttgatttgattct...

Basic information

species Glycine max
transcript GLYMA04G35870.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16104880|gb|BI892620.1|BI892620
EST:     CATATACATATTTGATAAAAACACAGCTTGACAGAATAGTAGTACCCATG                         GTGAATTATGAGTTTGATACATCAACTGGATCATTGAAAATATTAAATG
genomic: CATATACATATTTGATAAAAACACAGCTTGACAGAATAGTAGTACCCATGgtaagctgta ... caattttcagGTGAATTATGAGTTTGATACATCAACTGGATCATTGAAAATATTAAATG
EST: gi|208033926|gb|GD831442.1|GD831442
EST:     ATACATATTTGAT-AAAACACAGCTTGACAGAATAGTAGTACCCATG                         GTGAATTATGAGTTTGATACATCAACTGGATCATTGAAAATATTAAATGGC
genomic: ATACATATTTGATAAAAACACAGCTTGACAGAATAGTAGTACCCATGgtaagctgta ... caattttcagGTGAATTATGAGTTTGATACATCAACTGGATCATTGAAAATATTAAATGGC