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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAAGATTATAATGGTGGCCGTGATTTGGATGATTTTGTAGCATTCATCAATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaacaacatatgtttatagaaaccataattatatacttcatatctgaatggttgaattattcttgctgtgtag

Basic information

species Glycine max
transcript GLYMA03G39130.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6845919|gb|AW348209.1|AW348209
EST:     ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAG                         GCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
genomic: ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaa ... tgctgtgtagGCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
EST: gi|192297310|gb|FG992404.1|FG992404
EST:     ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAG                         GCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
genomic: ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaa ... tgctgtgtagGCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
EST: gi|308098193|gb|HO761364.1|HO761364
EST:     ATGAGAAATGTGGTACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAG                         GCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
genomic: ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaa ... tgctgtgtagGCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
EST: gi|17020695|gb|BM091729.1|BM091729
EST:     ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAG                         GCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
genomic: ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaa ... tgctgtgtagGCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
EST: gi|17021210|gb|BM092244.1|BM092244
EST:     ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAG                         GCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
genomic: ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaa ... tgctgtgtagGCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
EST: gi|58023280|gb|CX710021.1|CX710021
EST:     ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAG                         GCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT
genomic: ATGAGAAATGTGGCACCTACCGTGATGGGAAGGGACAGCTTACTTCTAAGgttagtcaaa ... tgctgtgtagGCTGGTATAATAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCT