1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaacactcccaccatttcccacacggcaagaactcctcttttgatgttgaatattgaataaccacttattgcgctgatataaag
species | Glycine max |
transcript | GLYMA03G33000.7 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGCTTTCTTCGGGCCAACGCAATTGGTCTCATGCCCATGATTGATCAG GGGGAGAAAGATGATAAGATAATTAGCTGTCTGTGCTGATGATCCEST: gi|7925031|gb|AW831057.1|AW831057
genomic: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaa ... tgatataaagGGGGAGAAAGATGATAAGATAATT-GCTGTCTGTGCTGATGATCC
EST: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAN GGGGAGAAAGATGATAAGATAATTGCTGTCEST: gi|254320655|gb|GR827104.1|GR827104
genomic: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaa ... tgatataaagGGGGAGAAAGATGATAAGATAATTGCTGTC
EST: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAG GGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATGATCCCGAGTATEST: gi|24136670|gb|BU927180.1|BU927180
genomic: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaa ... tgatataaagGGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATGATCCCGAGTAT
EST: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAG GGGGAGAAAGATGATAAGATAATTGCTEST: gi|5510301|gb|AI856743.1|AI856743
genomic: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaa ... tgatataaagGGGGAGAAAGATGATAAGATAATTGCT
EST: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAG GGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATGATCCCGAGTATEST: gi|298199436|gb|HO042799.1|HO042799
genomic: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaa ... tgatataaagGGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATGATCCCGAGTAT
EST: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAG GGGGAGAAAGATGATAAGATAACTGCTGTCTGTGCTGATG
genomic: GTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaa ... tgatataaagGGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGgtaaattaaacactcccaccatttcccacacggcaagaactcctcttttgatgttgaatattgaataaccacttattgcgctgatataaag
- - - - - - - - - - - - - - - - - AAGCAA