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TCTGGCTGCTAAAGGCAGTGTTCCAATTGGTATAGGCAGGAACTCTCATATCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacatcttcgatctttaattatatacaattctgttccttgttttacattctaaagccatttttttctcaagacaacaggtgaggcgcggtagctt...
species | Glycine max |
transcript | GLYMA02G47460.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TCAAAAGGGCAATAATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|22929719|gb|BU546858.1|BU546858
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|31465216|gb|CD407244.1|CD407244
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|9902053|gb|BE611021.1|BE611021
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATTGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|214004859|gb|DB988868.1|DB988868
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|15288165|gb|BI472056.1|BI472056
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATAATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|12489873|gb|BG043394.1|BG043394
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATTGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|51338121|gb|CO981987.1|CO981987
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATTGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|27424381|gb|CA935901.1|CA935901
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATTGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|31310766|gb|CD395969.1|CD395969
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|209702859|gb|BW655981.1|BW655981
genomic: TCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|20498182|gb|BQ273112.1|BQ273112
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAEST: gi|192316610|gb|FK006817.1|FK006817
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAA
EST: TCAAAAGGGCAATTATTGACAAGAATGCCCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|31465073|gb|CD407101.1|CD407101
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: GGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|6070729|gb|AW100116.1|AW100116
genomic: GGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATTGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGACGCTGCAAGGGAAACAGATGGGTATEST: gi|21637686|gb|BM107841.1|BM107841
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|13266691|gb|BG370154.1|BG370154
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAG AGTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|23728098|gb|BU762095.1|BU762095
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: TCAAAAGGGCAATTATTGACAAGAATGCTCGAATTGGGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTATEST: gi|7640083|gb|AW734392.1|AW734392
genomic: TCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
EST: GGGAAAATGTCAAG ATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
genomic: GGGAAAATGTCAAGgttataacat ... caattctcagATTATTAACAGTGACAATGTCCAAGAAGCTGCAAGGGAAACAGATGGGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGGCTGCTAAAGGCAGTGTTCCAATTGGTATAGGCAGGAACTCTCATATCAAAAGGGCAATTATCGACAAGAATGCTCGAATTGGGGAAAATGTCAAGgttataacatcttcgatctttaattatatacaattctgttccttgttttacattctaaagccatttttttctcaagacaacaggtgaggcgcggtagctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggtgagg