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GTGGAAATAGATCTTCTGACTGGAGAAACCAGATGTTTGCAGACAGATATTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAGgtaagctaatatatatgtgggtgaaattataaatctgaaagactgaaactatttaactatacatgagatcaagaataaaagttaatagtacattactatt...
species | Glycine max |
transcript | GLYMA02G44000.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAG ATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGAATATEST: gi|6724807|gb|AW309206.1|AW309206
genomic: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAGgtaagctaat ... cttcttacagATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGAATAT
EST: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAG ATTGAACGATCTTTTATCCAAAGGTAGGGTTTTTTCATGCTTGAAGAATATEST: gi|10232634|gb|BE801522.1|BE801522
genomic: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAGgtaagctaat ... cttcttacagATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGAATAT
EST: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAG ATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGAEST: gi|105632325|gb|DW246413.1|DW246413
genomic: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAGgtaagctaat ... cttcttacagATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGA
EST: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAG ATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGAATAT
genomic: TTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAGgtaagctaat ... cttcttacagATTGAAGGATCTTTTATCCAAGGGTTGGGTTTTTTCATGCTTGAAGAATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGAAATAGATCTTCTGACTGGAGAAACCAGATGTTTGCAGACAGATATTATCTATGATTGTGGACAGAGTCTCAACCCAGCTGTGGATTTAGGACAGgtaagctaatatatatgtgggtgaaattataaatctgaaagactgaaactatttaactatacatgagatcaagaataaaagttaatagtacattactatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtgggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaataaaa