1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CAAGGATGACTTCTTTGATTCGCTCTCATCCAACGTGCATGGTAATACTTCACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGgtaattcctatctttcgtagatctcatatttgggggacaatgttcaattcttttgctgatttgtggtacag
species | Glycine max |
transcript | GLYMA02G11300.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAG ACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGCGGGGGCCGTGGCCCTEST: gi|16280198|gb|BI943826.1|BI943826
genomic: CACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGgtaattccta ... tgtggtacagACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCT
EST: ATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAG ACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCTEST: gi|254316143|gb|GR825952.1|GR825952
genomic: ATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGgtaattccta ... tgtggtacagACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCT
EST: CACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAG ACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCTEST: gi|209697515|gb|BW670016.1|BW670016
genomic: CACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGgtaattccta ... tgtggtacagACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCT
EST: CACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAG ACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCT
genomic: CACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGgtaattccta ... tgtggtacagACGTTTGGTGATTTTGTGAGGCACCGTGGTGGTCGTGGGGGCCGTGGCCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGGATGACTTCTTTGATTCGCTCTCATCCAACGTGCATGGTAATACTTCACAGAATGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGgtaattcctatctttcgtagatctcatatttgggggacaatgttcaattcttttgctgatttgtggtacag
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