1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAAGATGCCAAATCCACTTATCAACGTGTTGAGGAAGGGAACCTTCCATATTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTGgtaggttttgtactggtgttggaacagttactgcgtgataattgatgctttctgtaaaatcttttactttttctgggtcaatcattctccaaaatattgagtaatggtattatcttccagtactgattggatcatatgtttgcag
species | Glycine max |
transcript | GLYMA02G07690.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTG GCCTAGATCCATGGCAACAGATTACATTAGTGAAGAAAGTTAAATATCACGEST: gi|13787555|gb|BG650147.1|BG650147
genomic: TTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTGgtaggttttg ... atgtttgcagGCCTAGATCCATGGCAACAGATTACATTAGTGAAGAAAGTTAAATATCACG
EST: TTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGGTGGATTTG GCCTAGATCCATGGCAACAGATTACATTAGTGAAGGAAGTTAAATATCACGEST: gi|192299881|gb|FG990089.1|FG990089
genomic: TTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTGgtaggttttg ... atgtttgcagGCCTAGATCCATGGCAACAGATTACATTAGTGAAGAAAGTTAAATATCACG
EST: TTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTG GCCTAGATCCATGGCAACAGATTACATTAGTGAAGAAAGTTAAATATCACG
genomic: TTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTGgtaggttttg ... atgtttgcagGCCTAGATCCATGGCAACAGATTACATTAGTGAAGAAAGTTAAATATCACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGATGCCAAATCCACTTATCAACGTGTTGAGGAAGGGAACCTTCCATATTTATGCATGGATCTCTTATACCAGTATACATTGCTTGTTGTTGGATTTGgtaggttttgtactggtgttggaacagttactgcgtgataattgatgctttctgtaaaatcttttactttttctgggtcaatcattctccaaaatattgagtaatggtattatcttccagtactgattggatcatatgtttgcag
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