1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGgcaagtcttatatatacgttactattattgctatatatatatgtctcttaaagcatctttaatggtttttaagcatttcaataactttttatttcaacga...
species | Glycine max |
transcript | GLYMA02G03990.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAG TGAATTCATAGEST: gi|298195403|gb|HO039234.1|HO039234
genomic: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGgcaagtctta ... gatatttcagTGAATTCATAG
EST: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAG TGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCEST: gi|20813541|gb|BQ298019.1|BQ298019
genomic: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGgcaagtctta ... gatatttcagTGAATTCATAGAGCAATGGGTCCAAATTTGTACTCC
EST: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAG TGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAAGCCCAAGGTEST: gi|20813542|gb|BQ298020.1|BQ298020
genomic: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGgcaagtctta ... gatatttcagTGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAAGTCCAAGGT
EST: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAG TGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAA
genomic: GGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGgcaagtctta ... gatatttcagTGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGgcaagtcttatatatacgttactattattgctatatatatatgtctcttaaagcatctttaatggtttttaagcatttcaataactttttatttcaacga
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