1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CAAGTCCTGGTGGAGTTTGCAAATGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCAgtaagtgtttttgtaatctttttgatgaatcaatgaccgagttaggtcttgatgtttattctcatttttttttatcag
species | Glycine max |
transcript | GLYMA02G00750.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ATGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCA GACCTGGTGGAAAACAATCCCCTTATTGCAGTTGACGTTCTCACTAAGTTGEST: gi|209723773|gb|BW665682.1|BW665682
genomic: ATGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCAgtaagtgttt ... tttttatcagGACCTGGTGGAAAACAATCCCCTTATTGCAGTTGACGTTCTCACTAAGTTG
EST: ATGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCA GACCTGGTGGAAAACAATCCCCTTATTGCAGTTGACGTTCTCACTAAGTTGEST: gi|193568019|gb|FK524356.1|FK524356
genomic: ATGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCAgtaagtgttt ... tttttatcagGACCTGGTGGAAAACAATCCCCTTATTGCAGTTGACGTTCTCACTAAGTTG
EST: TGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGTAAAGTTGCCA GACCTGGTGGAAAACAATCCCCTTATTGCAGTTGACGTTCTCACTAAGTTG
genomic: TGATCCAAAACTTGTATATCACTGTGGACTGACACCAAG-AAAGTTGCCAgtaagtgttt ... tttttatcagGACCTGGTGGAAAACAATCCCCTTATTGCAGTTGACGTTCTCACTAAGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGTCCTGGTGGAGTTTGCAAATGATCCAAAACTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCAgtaagtgtttttgtaatctttttgatgaatcaatgaccgagttaggtcttgatgtttattctcatttttttttatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA