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TGATCATGCAGATAAATATCGTTATGGTGTTGTCCGACAGTTTGTTGGCCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatctttaactgtattcttctgtcattattagatctacatcaattctatactagcaacaaacctgtgtttagattagtgaatattattatggctt...
species | Glycine max |
transcript | GLYMA01G39200.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|51336069|gb|CO979935.1|CO979935
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|208284994|gb|GE082098.1|GE082098
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: ATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|31459515|gb|CD401543.1|CD401543
genomic: ATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|31462284|gb|CD404312.1|CD404312
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|51345228|gb|CO985961.1|CO985961
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|209710615|gb|BW676541.1|BW676541
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTGEST: gi|51335002|gb|CO978868.1|CO978868
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
EST: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATA GAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
genomic: CCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatct ... ttatctgcagGAAACAATGAAAGTGGACGAATGGTGCTAAATCAAACCTTTACAATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATCATGCAGATAAATATCGTTATGGTGTTGTCCGACAGTTTGTTGGCCATGGAGTTGGAAGTGTTTTTCATGCTGATCCTGTTATTCTTCACTATAgtaattatctttaactgtattcttctgtcattattagatctacatcaattctatactagcaacaaacctgtgtttagattagtgaatattattatggctt
- - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT